r - draw two heatmap with the same cell size -


i drawing 2 heatmaps using heatmap.2 separately different number of rows. there way set output of plots actual cell size same between 2 heatmaps?

library(gplots) data(mtcars) x<-as.matrix(mtcars) ###  heatmap has 32 rows heatmap.2(x,key=f)   x1<-x[1:10,] ###  heatmap has 10 rows heatmap.2(x1,key=f) 

this can done, albeit in of kludgy way, using lmat, lhei, , lwid arguments of heatmap.2. arguments passed layout , lay out various parts of image.

library(gplots) data(mtcars) x <- as.matrix(mtcars) ###  heatmap has 32 rows heatmap.2(x = x,           key = f,           lmat = matrix(c(4,2,3,1),                         nrow=2,                         ncol=2),           lhei = c(0.1,0.9),           lwid = c(0.3,0.7)) 

as can see, matrix argument gives matrix looks like:

     [,1] [,2] [1,]    4    3 [2,]    2    1 

the heatmap first thing plotted, followed row , column dendrogram. arguments lhei , lwid give relative size of each of layout column , rows described in lmat. creativity, lay out panels allow move things , down saw fit. proof of concept, did following, scales lhei 10/32.

x1<-x[1:10,] ###  heatmap has 10 rows heatmap.2(x = x1,           key = f,           lmat = matrix(c(4,2,3,1),                         nrow=2,                         ncol=2),           lhei = c(1-0.9*(10/32),0.9*(10/32)),           lwid = c(0.3,0.7)) 

before: larger heatmap

after: smaller heatmap


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